Program
| Sun. 8 | Mon. 9 | Tue. 10 | Wed. 11 | Thu. 12 | ||
|---|---|---|---|---|---|---|
| 9:00-10:30 | Gusfield Part 1 |
Gusfield Part 2 |
Gusfield Part 3 |
Gusfield Part 4 |
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| 10:30-11:00 | Coffee | |||||
| 11:00-12:30 | Hajirasouliha Lect. 1 |
Hajirasouliha Lect. 2 |
Oesper Lect. 2 |
Hajirasouliha Lect. 3 |
||
| 12:30-14:00 | Lunch | |||||
| 14:00-15:30 | Welcome & Hackathon |
Sironi Lect. 1 |
Eichler Lect. 1 |
Eichler Lect. 2 |
Sironi Lect. 2 |
|
| 15:30-16:00 | Coffee | Excursion & Dinner |
Coffee |
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| 16:00-17:30 | Oesper Lect. 1 |
Oesper Lect. 3 |
Oesper Lect. 4 |
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Speakers and Topics:
Evan Eichler
- Long-read sequencing and pangenome perspective of structural variation and disease association.
- Genome organization and challenges for pangenome construction
Dan Gusfield
- Ancestral Recombination Graphs and Networks in Genomics and Evolution
Iman Hajirasouliha
- Introduction to Structural Variants and short-SV methods
- Deep Learning methods for variant calling and tumor detection
- Methods for Metagenome analysis using multiple sequencing platforms
Layla Oesper
- Introduction to Tumor Phylogenetics
- Methods for Reconstructing Tumor Phylogenies
- Comparison of Tumor Phylogenies
- Creating Consensus Across Inferred Tumor Phylogenies
Manuela Sironi
- Transposon domestication in mammals
- Molecular evolution and host adaptation of human-infecting herpesviruses.